Rainsoft 14 Day Timer Question

Hello,

I have a question about a Rainsoft 14 day timer. I recently replaced the 120v clock motor as the old one stopped working. Now, I watched the timer cycle through, and it appears to be backflushing during all of the cycles. I've confirmed this by watching the cams which control the valve positions. They rotate to the same position for all of the cycles, and skip through the rest.

Is there something elst wrong with the timer, or does something else in the timing mechansim need to be reset?

Thank you.