@engineer,
I may have misinterpreted the OP's question. I thought she was asking about "loss per day" in both cases but specifically whether the "a" was needed and shortened the phrase in her question.
They achieve a precision of around
a 0.1 second loss per day.
or
They achieve a precision of around
0.1 second loss per day.
engineer is correct if "loss per day" is not included in the sentence.